Data: Quantifying mass-dependent isotope fractionation and nuclear field shift effects for the light rare Earth elements in hydrous systems

Background:This research contribution is part of the project "Linking continental emergence and climatic evolution on the early earth". The aim of the project is to use stable isotopes of rear Earth elements in ancient marine sediments to reconstruct palaeoenvironment. Therefore, ab initio calculations were performed to understand isotope fractionation on a molecular scale from a theoretical perspective. 

The ab initio calculations contain reduced partition function ratios (as lnβ) for aqueous complexes of some light rear Earth elements (La, Ce, Nd). These values help to predict mass-dependent isotope fractionation of these elements in hydrous systems like seawater or hydrothermal fluids. In addition, lnβ values for mass-independent nuclear field shift effects for La-complexes and Ce oxidation reactions are included. Also, the data contains speciation models of rear Earth elements in hydrous systems to quantify their complexation and isotope fractionation with varying fluid pH and temperature.

The lnβ values were calculated from molecular frequencies and total energies derived from calculations using the software packages ORCA, and DIRAC on the high performance computing (HPC) cluster at James Cook University. The atomic coordinates of the input files were created in AVOGADRO. The lnβ values were calculated from molecular vibrations and energies. Speciation modelling was performed in PHREEQC with fluid parameters obtained from the MARHYS database.

This data record contains:

1 MS Excel (.xlsx) file containing ab initio calculations of aqueous complexes of rare Earth elements and speciation models of seawater and hydrothermal fluids.

A more detailed description of the methodology and results is available in the related publication.

Software/equipment used to create/collect the data: ORCA, DIRAC, PHREEQC

    Data Record Details
    Data record related to this publication Ab initio calculations
    Data Publication title Data: Quantifying mass-dependent isotope fractionation and nuclear field shift effects for the light rare Earth elements in hydrous systems
  • Description

    Background:This research contribution is part of the project "Linking continental emergence and climatic evolution on the early earth". The aim of the project is to use stable isotopes of rear Earth elements in ancient marine sediments to reconstruct palaeoenvironment. Therefore, ab initio calculations were performed to understand isotope fractionation on a molecular scale from a theoretical perspective. 

    The ab initio calculations contain reduced partition function ratios (as lnβ) for aqueous complexes of some light rear Earth elements (La, Ce, Nd). These values help to predict mass-dependent isotope fractionation of these elements in hydrous systems like seawater or hydrothermal fluids. In addition, lnβ values for mass-independent nuclear field shift effects for La-complexes and Ce oxidation reactions are included. Also, the data contains speciation models of rear Earth elements in hydrous systems to quantify their complexation and isotope fractionation with varying fluid pH and temperature.

    The lnβ values were calculated from molecular frequencies and total energies derived from calculations using the software packages ORCA, and DIRAC on the high performance computing (HPC) cluster at James Cook University. The atomic coordinates of the input files were created in AVOGADRO. The lnβ values were calculated from molecular vibrations and energies. Speciation modelling was performed in PHREEQC with fluid parameters obtained from the MARHYS database.

    This data record contains:

    1 MS Excel (.xlsx) file containing ab initio calculations of aqueous complexes of rare Earth elements and speciation models of seawater and hydrothermal fluids.

    A more detailed description of the methodology and results is available in the related publication.

    Software/equipment used to create/collect the data: ORCA, DIRAC, PHREEQC

  • Other Descriptors
    • Descriptor
    • Descriptor type
  • Data type dataset
  • Keywords
    • Ab initio
    • Rear Earth elements
    • Aqueous speciation
    • Isotope fractionation
  • Funding source
    • James Cook University
    • DECRA
  • Research grant(s)/Scheme name(s)
    • -
  • Research themes
    Not aligned to a University theme
    FoR Codes (*)
    • 370303 - Isotope geochemistry
    • 370399 - Geochemistry not elsewhere classified
    • 370599 - Geology not elsewhere classified
    SEO Codes
    • 280107 - Expanding knowledge in the earth sciences
    Specify spatial or temporal setting of the data
    Temporal (time) coverage
  • Start Date 2022/12/15
  • End Date 2023/08/25
  • Time Period
    Spatial (location) coverage
  • Locations
    • Queensland, Australia
    Data Locations

    Type Location Notes
    Attachment IsotopeRareEarthElements_Data.ods MS Excel workbook saved in OpenDocument (.ods) format
    Attachment IsotopeRareEarthElements_Data.xlsx
    The Data Manager is: Alexander McCoy-West
    College or Centre College of Science & Engineering
    Access conditions Open: free access under license
  • Alternative access conditions
  • Data record size 2 files: 1.37MB
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    Citation Nestmeyer, Mark; McCoy-West, Alexander (2024): Data: Quantifying mass-dependent isotope fractionation and nuclear field shift effects for the light rare Earth elements in hydrous systems . James Cook University. https://doi.org/10.25903/2ky5-yh72